CDS

Accession Number TCMCG065C29823
gbkey CDS
Protein Id XP_012698155.1
Location complement(join(2066723..2066770,2066880..2066999,2067093..2067179,2067266..2071176,2071293..2071691,2071810..2072909,2073056..2073111,2073655..2073781,2073858..2073981,2074069..2074232,2075638..2075789))
Gene LOC101775244
GeneID 101775244
Organism Setaria italica

Protein

Length 2095aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA207554
db_source XM_012842701.2
Definition SCAR-like protein 1 isoform X2 [Setaria italica]

EGGNOG-MAPPER Annotation

COG_category S
Description regulation of actin nucleation
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE -
KEGG_ko -
EC -
KEGG_Pathway -
GOs GO:0000902        [VIEW IN EMBL-EBI]
GO:0000904        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005856        [VIEW IN EMBL-EBI]
GO:0005886        [VIEW IN EMBL-EBI]
GO:0006996        [VIEW IN EMBL-EBI]
GO:0007010        [VIEW IN EMBL-EBI]
GO:0007015        [VIEW IN EMBL-EBI]
GO:0008064        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0009653        [VIEW IN EMBL-EBI]
GO:0009888        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010026        [VIEW IN EMBL-EBI]
GO:0010090        [VIEW IN EMBL-EBI]
GO:0010091        [VIEW IN EMBL-EBI]
GO:0010638        [VIEW IN EMBL-EBI]
GO:0016020        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0030029        [VIEW IN EMBL-EBI]
GO:0030036        [VIEW IN EMBL-EBI]
GO:0030154        [VIEW IN EMBL-EBI]
GO:0030832        [VIEW IN EMBL-EBI]
GO:0030833        [VIEW IN EMBL-EBI]
GO:0030838        [VIEW IN EMBL-EBI]
GO:0031209        [VIEW IN EMBL-EBI]
GO:0031334        [VIEW IN EMBL-EBI]
GO:0032271        [VIEW IN EMBL-EBI]
GO:0032273        [VIEW IN EMBL-EBI]
GO:0032502        [VIEW IN EMBL-EBI]
GO:0032535        [VIEW IN EMBL-EBI]
GO:0032956        [VIEW IN EMBL-EBI]
GO:0032970        [VIEW IN EMBL-EBI]
GO:0032989        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0033043        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043228        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043232        [VIEW IN EMBL-EBI]
GO:0043254        [VIEW IN EMBL-EBI]
GO:0044087        [VIEW IN EMBL-EBI]
GO:0044089        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045010        [VIEW IN EMBL-EBI]
GO:0048468        [VIEW IN EMBL-EBI]
GO:0048518        [VIEW IN EMBL-EBI]
GO:0048522        [VIEW IN EMBL-EBI]
GO:0048856        [VIEW IN EMBL-EBI]
GO:0048869        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0051125        [VIEW IN EMBL-EBI]
GO:0051127        [VIEW IN EMBL-EBI]
GO:0051128        [VIEW IN EMBL-EBI]
GO:0051130        [VIEW IN EMBL-EBI]
GO:0051493        [VIEW IN EMBL-EBI]
GO:0051495        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0065008        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0071944        [VIEW IN EMBL-EBI]
GO:0090066        [VIEW IN EMBL-EBI]
GO:0090558        [VIEW IN EMBL-EBI]
GO:0090626        [VIEW IN EMBL-EBI]
GO:0097435        [VIEW IN EMBL-EBI]
GO:0110053        [VIEW IN EMBL-EBI]
GO:1902903        [VIEW IN EMBL-EBI]
GO:1902905        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGATTCGGTACCAGATACGGAACGAGTACGGGCTGTCGGATCCGGAGCTGTACGCGGCGCCGGGGGAGGAGGATGACCCGGAGGCGCTCCTCGAGGGCGTCGCCATGGCCGGCCTCGTCGGCGTGCTCCGGCAGTTGGGGGATCTCGCCGAGTTTGCAGCTGAAATTTTTCATGACCTTCACGAAGATGTGATGGCCACTGCTTCTAGAGGACATGGTTTAATGCTCCGGTTGCAGCAGCTAGAGGCAGAATTTCCAGCAGTTGAGAAGGCAATTATATCCCAGACTGACCACTCAAATTATCCACATGATGATGGTGTCGACTGGCATGCTAATCTTCAACTTAAACAGAATATGATCACACAAGGAGATATGCCTCGCTTCATTTTGGATTCATATGAAGAATGCCGTGGTCCACCACACTTGTTCACTCTGGATAAGTTTGATGTTGCTGGTGCTGGAGCCTCCTTAAAACGATATTCAGACCCCTCTTTCTTCAAGGCAGAACATACCTCCAACATGTTAGAAATTGATGTTTCAATTGAAAAGAAGCCCCGTCGACTTAAGAAGGCTATACGTTGGAGGAAAGGGGCGACACTTGAATCATTACTTGCAAAGTCTGAATCTTTTACTACCCCCAAGGATCGAACTTCGAGGAAAGTTCCACCTAGGACAACAAAGTTGAAATCCAGGCATCCAAGGAGTCCTGACCATAAAACTATTAGCAGAATCTGCAGGGAGCATCTGCTAGAAGTAATTTCATCACAACAAAAAATTTTCTCCAGATATTCTGGAAGGCAATGTCATGTGAGATTTAGGTCAACTGACTCGAGTGAAACGGGAGAAATGGAGAATTTTGGTGCCATTGTTCAGTCTTCTGGTAAACTGGAACTTACTAAAATTGTTCCAATAAACGAATCCAATACCATGGAGATTATATCTGCACCCACTGATGGATCAGCTTACCTGGAGCTAGGTGATAAACAAATTTTGGGGAAACAACATGAACCTTTAGAAAAAAATGGCATGGTCCGTGACTTAGGAAAGCTGCAGGATTGTCCAAACTTCCAGGTTGGTGAAAGTAATCACAGCTCGCATTCAGGACATGAAGAGAAACACATTTTAGCTGGGGTTCCTGCTGATCAAGATGCTGATGGCTGCAGGCCTGATGACATTTGTAGTGATCAAGACAACTTCATCGACGCTCTTAACAACATGGGCCCAGAAGGTGAAGCAGATCCTGAAATAGAAACTGAATTTGATCCCAGTGCCAACGTGGAACAGATTGAATTGAACCGTGACAGCAAGGAAGGTGAAGATGCATTGTATGCGGAGTCCCCACAAGTAGGTCCTGCAATAGACTCGTCACCAGGGTTCAACAGTTCATGCAATGCTGAAGAAGCGACCTGTATGGACTTGCCAAGTGACTCTGCTAATCCCGCAGTGTCAGCCAGTAATGGTCCTAGCTCTGTTTCACAATCTGGAAGACAATTGAATGATGTTGATTGGATCAAAGATGAAGAACCTTTTGATGATGAGGATCTAATGGATGTGAGCTCATCATCTAGTGTAGCTTCTGTCAATGCTGTCTTACAAACCGATGAAGATCTCTATGGTTGTCAACAACACCAAGAGAAAGCTTATCACTATCAAAGTAGTGATAATGCAGCTGTTATCCATAGTTCTGATAAACATTCACCCAAGACATCTAGTGACTTGGATGGTACGGCTGTCGGCAACAACAATTACACTGACGAAGTATATTGTTCCATGGAGCAAGGCCAGGATGTTGTGCTAGATGATACTTCTATGGTATCGAGCAAACCTAACTATGTTCCAGAAGACGAAGACAAACTCAGTTTTAGGATTGCTGATGATTTGTTTCCCCACCCGACCATACCCAATCAAGAGGAAATACAGGAGATGGAGAAAGAATTGGAAGGTGGATCTCTAGATACAGACGCTTCACCTGGCATACTTGCATCATGGCCAGATAAGAACCATGTTATGTGCTTGAATGATGTAGAGATGGACAAGGACAATGTTATCGTTCCTGAAGAAATTGCTGCTGATATGGCCCCAACAGGTTTGGATCCTCATGACAACCATGATCATCAAGATGGAATTGCACCAGAACATTCAGGCATGCGTAATAATCTACCGTATGAATCATATGATGATGAGATTGCTGAAGATATGCACTCTTTACTAAACGATGGTCTATCAACTCCTTTTAATAAGGATGTTGCAGAGGATAATCAAATAGTTGTGCTTGAAGGAGGGGCCTGTCCAGCTAGCCTCAACTCACACAAAGAAGATTCTGAGCAAGCACCTGCCATGGCCAGGAACTTATCTGATGTCCAAGAGTTTCCAGTAGTAATTCAAGGTGTACCTTCTCAAGAGGAGACAGAAGCTCATGCAGTAGAGACCCTTGCACCTGTGTCTTGTGTGTTCAGTGCTGATACAGAACCAGTGGGGATTAGTGTGCTTCCAGCCCCTAATACTTCCTCTCTACCTGACAACAGTAGTTCATGTGTAGAACAACATGCATTGACTGAAATGGAAGACATTGTGGAGGGTGGCAAAGTTGTGGTTGCAGAAGAATCAACTACTAGCAGGTTTGCAGATGACGTGGTACCTCCTGAAGATTTTATTGATGATGCCATATATACTGAAAAAACACAGATTCTGGCTACAGATTCAACTGAAGAAGCCTCTAGGCATGATCTGCAACTACAGCATAATTCTCCTTTAAGGGAAGGGTTGGAACCAGTAGAAGCTACTGACAGAAATCTTGGGGAAGTAGATGCATCAAGAGAATATATATCTAAGGAAAGGATGTTGCAGACAGACAATATTCCTCCTCTCAATGAAATAGAGCCTACAGGTGAAAAATGTAGTGACAGGGATGAGGTTCTTTCCGCAGGACATTTTCCTGTAGAATCTGATTATCAAGAGGAATTACTAGAGTCCAGTCATAATGCTGGAGTTCACTCTCTGTGTGATTTGGATAAGGATTTTGCAGTAAGCCTGAAATGTAACACCATGGGGGAACAACCAGAGGATGTTGACGATCAAGATTTGGCTTGGGGGATGCCCGATCAAGATTTTACTAGTACAAACCCATTCATGGATCCTGCCTACATGCTGAGCCTAACTCAAACTTGTCCATCTCCCATTGTGAGTTGCCAACCATGTTTCCCTGAAGAACAGGATTTCCTTTCAGAACTTCTAGTGCAGCATGACAATATGGGAGCAGCTGCTGATTCCCTTTGGGAGCCTGCAACTCCACCTGATGAAGCGCCATTGCCATCAGAAGTTATGACTGAAGAAGATTTCAGATCCTTCTGCCGTGAGTATCATGAGATAAATTTTTCAGCTGCCGCTGAAGGTTGTCACAGTGAACCGGCCTCAGACTCTAACAATATTTCAAATGCTTTTCTGGTCAGTGAATCAGATTTTCCAAGTTCTGTTTCTGCCTTGCCAGTGAAGTTAAACCAGGAAGCCTGTGTTCATTCTAAGTTTGGTTCTCAATGTGCTGAGCCTTCATCTACCATGGATATACAAGGCGCTACATCAATGACCTTTTCTGGCAAAGAAGATCTCACGGATGAGACACCAGGAGTAGATTCTCATTTAAAATCTGATGCATCTTTCAGTGTTAACAGAAGTTCTGAACTAGATATGCTCTCTGTTCCAGTAGATTTACAGCAGGAACAGCTGTCTGGAATTGATTCTCATAGTAGTTCTCCTTTGTTGGATAAAGAGATGACCGGTGAAGGATGCTGCTCTCCTTCAAGTGATGTTGTTGAAGTGAAACACGATCTAGAAATCCACGCCAATCTTGCTCTACATTCTTTTATTAATGAAACTGGAGACGAACTGGATGTTGCTGTACAAGTGGAACCAGAGGTAGGAGCTCATGCTGATGATAACCAAGATATTCCATGTTGTTCAACTAGCGAAAAGGATGATTCCCTTATGGGCAAACCTGTTCTAGTTCAGGAGTCAGAAGTTTTTGCCTTCGGTGAATTTGATTCTCCAATCGTTCCATTATCTTCAATTGATGACATTGAAGACAATCAAGACTCTGCTTCGAGGACTTATGTTCAAACAGAACAAGAGTCAGAATGCTGCACCTCAGGTGAACTTGATTCTCAAACCACTCCATCCCCTTTGCTTGATGAGAAGATTGACAAACTGGACGGCCCTCCTTTGAGCAATGCTGCCATGCTGGATCAGGAATCAGAAGTTTGTGTTCCAAGTGGGCTTGATTCTCGAATCGCTCTATGTTCTTCAACTGATGAGAATGTACATGAATTGGATCATCCTCCTTTGAGCAGTTCAGTTTTAATCAATCCTGAGTCAGAAGATCATGTGTTGGGTGACACTAGTTCCAAGGTTACTATGTGTTCTTTAGTTGAAGACAAGATTGATGAATCCGAAGATCCTCAACCAAACCATAATTTTCCTGAGGTACGGCAGGAAGCTCTTGCATCCCCTGAATTAGACTTTCAGGTTGCTCCATGTCCCTTGAATGATGATAAGGTTGGTGAAATAGAAGGGCCTCCATCGTGCAATGGCCGGGTGGAATCAGAAAAGGAATCTGATTGCTCAATTGAATCTGATTCCCAAAGTGCGCCATGTTCTTCAAATTCACCAGTACTAGCTGACACAGGAGTATTGACTTCTCCTGTCATGCCTAATAATGAGGAAATGAATCAGTTGTCTCCTGGTCCGCCACCCGCTGTACAATTTCAAAATGATTCCTACGAAGATCCTCAAGCTCAAGCACCACCCCCTCTCCCTCCCCTCCAGTGGAGGCTTGGTAGGCCTCGGCTAGGGCTTCTAAGTAGAAAAAGCTCTATGCCTGAGCCTGCAAGGAGCATAGATCCTGTTTTCCAGGCATCAAACCAAGACATGGATATCAGGCTAGGTTTGCTTGATCAACCAGATAGATCAATAGAACCAGTATCCTCTCAAGCGACCGAAGAAGATACGCATCAGAGTTCTTTGTTAGACGGTAGTGATCAAAATGTAGAAGTTGGATTGTCGACCAGTGTCACAGTAACTGGTGTGGCAAGGACTGAACACTATTGGCCATTCTCAGAAGCTTCAGAGAACATTAAGGGACCGGAGCATATTTCTTCATCATTTAACAGAAATCTGGATGCTGGGGTCACATCAGCAACAGCTGACGAGGAACATCTGGATGATTCTGGGGTGACACATGGAGCAGTTTTATACTCATCAGACCCGCTGCTTCGATTACCTGCAGATGAACAGCAGGAACCTCAACTGTGCACCTTATCTTCAGATACTCGAGAAACTAGTGTGCATCCCAGCCGTATGCATCCAGGTGCATCTGAAAATGATAAGTCAACAGATGCTGCTGGTGGCATGGAAAGCACCTCAACAAAGGGACCTGATTATGAAAATAGTTTTTACCAGCAACCTCAGCATGTTGAATCGTTCTCAAAGACTTCAGATTATGGAGAGCATATTACAAATGCATCGGTGGAGGGTGTAAAACATCAGTCTGGTACAAGCGAGACACTTTCAGACCCAGCAAAGCATTCTGCACCAGGCACATTGTTGAAAGATGGGAATAGCAAGGGGAGTCAAATTTTGCAGGAACAAAATGTGGGTAGTTCTCAGGACAATAAGTCAGGAGGCCCATTGCCCAGCTCGGAATCAATGGCATCTGAAGATTATCGACATGATGAATATAATTTGGAGAGAGAAAATAGACACCCGCCTAGCAACCCAGGCCCACTAGTGGCATGGCCTGGTGATAAAAATAACTTCTTCAGTGGCCTTGATGAAGCTAGCTTTGCGCATGCTGAGCAACCACCTGTGATGGGATGGACTGTTGGGCCTCAGATGATTCATCCTAAGTATGGTATATCAGCAGAAGAGAGCCAATTTGAGCCAAATATCACCGACAATCATTTAATCAAGAAGCCTATTTCAATTAAAAACATCCCAAGGAATCCACTGGTCGATGCTGTTGCTGCTCATGATAGAAGCTCGATGCGAAAGATTTCAGAGCTTGCACCATCGGCTGACAAGCCGAAGCCCACCGAGAGAAATCTGTTGCTAGAGCAGATAAGAAACAAGACCTTCAACCTGAAACCGGTGGCTCCTTCTCAGCCAACAGCCATGAGATCCCCTGCTAGAGCTAATACTAGAAACTTGAAGGTTGCTGCAATCATAGAAAAGGCAAATGCCATCCGACAGGCGGTGGGAAGTGATGATGAAGACGCAGATAGTTGGAGTGACGCCTAG
Protein:  
MIRYQIRNEYGLSDPELYAAPGEEDDPEALLEGVAMAGLVGVLRQLGDLAEFAAEIFHDLHEDVMATASRGHGLMLRLQQLEAEFPAVEKAIISQTDHSNYPHDDGVDWHANLQLKQNMITQGDMPRFILDSYEECRGPPHLFTLDKFDVAGAGASLKRYSDPSFFKAEHTSNMLEIDVSIEKKPRRLKKAIRWRKGATLESLLAKSESFTTPKDRTSRKVPPRTTKLKSRHPRSPDHKTISRICREHLLEVISSQQKIFSRYSGRQCHVRFRSTDSSETGEMENFGAIVQSSGKLELTKIVPINESNTMEIISAPTDGSAYLELGDKQILGKQHEPLEKNGMVRDLGKLQDCPNFQVGESNHSSHSGHEEKHILAGVPADQDADGCRPDDICSDQDNFIDALNNMGPEGEADPEIETEFDPSANVEQIELNRDSKEGEDALYAESPQVGPAIDSSPGFNSSCNAEEATCMDLPSDSANPAVSASNGPSSVSQSGRQLNDVDWIKDEEPFDDEDLMDVSSSSSVASVNAVLQTDEDLYGCQQHQEKAYHYQSSDNAAVIHSSDKHSPKTSSDLDGTAVGNNNYTDEVYCSMEQGQDVVLDDTSMVSSKPNYVPEDEDKLSFRIADDLFPHPTIPNQEEIQEMEKELEGGSLDTDASPGILASWPDKNHVMCLNDVEMDKDNVIVPEEIAADMAPTGLDPHDNHDHQDGIAPEHSGMRNNLPYESYDDEIAEDMHSLLNDGLSTPFNKDVAEDNQIVVLEGGACPASLNSHKEDSEQAPAMARNLSDVQEFPVVIQGVPSQEETEAHAVETLAPVSCVFSADTEPVGISVLPAPNTSSLPDNSSSCVEQHALTEMEDIVEGGKVVVAEESTTSRFADDVVPPEDFIDDAIYTEKTQILATDSTEEASRHDLQLQHNSPLREGLEPVEATDRNLGEVDASREYISKERMLQTDNIPPLNEIEPTGEKCSDRDEVLSAGHFPVESDYQEELLESSHNAGVHSLCDLDKDFAVSLKCNTMGEQPEDVDDQDLAWGMPDQDFTSTNPFMDPAYMLSLTQTCPSPIVSCQPCFPEEQDFLSELLVQHDNMGAAADSLWEPATPPDEAPLPSEVMTEEDFRSFCREYHEINFSAAAEGCHSEPASDSNNISNAFLVSESDFPSSVSALPVKLNQEACVHSKFGSQCAEPSSTMDIQGATSMTFSGKEDLTDETPGVDSHLKSDASFSVNRSSELDMLSVPVDLQQEQLSGIDSHSSSPLLDKEMTGEGCCSPSSDVVEVKHDLEIHANLALHSFINETGDELDVAVQVEPEVGAHADDNQDIPCCSTSEKDDSLMGKPVLVQESEVFAFGEFDSPIVPLSSIDDIEDNQDSASRTYVQTEQESECCTSGELDSQTTPSPLLDEKIDKLDGPPLSNAAMLDQESEVCVPSGLDSRIALCSSTDENVHELDHPPLSSSVLINPESEDHVLGDTSSKVTMCSLVEDKIDESEDPQPNHNFPEVRQEALASPELDFQVAPCPLNDDKVGEIEGPPSCNGRVESEKESDCSIESDSQSAPCSSNSPVLADTGVLTSPVMPNNEEMNQLSPGPPPAVQFQNDSYEDPQAQAPPPLPPLQWRLGRPRLGLLSRKSSMPEPARSIDPVFQASNQDMDIRLGLLDQPDRSIEPVSSQATEEDTHQSSLLDGSDQNVEVGLSTSVTVTGVARTEHYWPFSEASENIKGPEHISSSFNRNLDAGVTSATADEEHLDDSGVTHGAVLYSSDPLLRLPADEQQEPQLCTLSSDTRETSVHPSRMHPGASENDKSTDAAGGMESTSTKGPDYENSFYQQPQHVESFSKTSDYGEHITNASVEGVKHQSGTSETLSDPAKHSAPGTLLKDGNSKGSQILQEQNVGSSQDNKSGGPLPSSESMASEDYRHDEYNLERENRHPPSNPGPLVAWPGDKNNFFSGLDEASFAHAEQPPVMGWTVGPQMIHPKYGISAEESQFEPNITDNHLIKKPISIKNIPRNPLVDAVAAHDRSSMRKISELAPSADKPKPTERNLLLEQIRNKTFNLKPVAPSQPTAMRSPARANTRNLKVAAIIEKANAIRQAVGSDDEDADSWSDA